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INDEXED
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SequenceFile
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IGVFFI7241APOI
IGVFFI7241APOI
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 7339
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7339_R2
md5sum
271f90529fb4fbd5b07135a7d95a0d66
Content MD5sum
daf15804cd583fb964ad5d7ca2b60e02
File Size
13 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1911_L6_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7339
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
218865911
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1332WZRQ
yaml
seqspec
seqspec of IGVFFI7510AQCA, IGVFFI7241APOI
Jason Buenrostro, Broad
1.3 KB
validated