IGVFFI7226HKRF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2331GZHK(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP029_G4_P078_L007_R2

md5sum

adebcb8e022ab1fa6d10c299c8e8844f

Content MD5sum

e51b9f0466f75945d314d2c39c92fa0e

File Size

11 GB

Submitted File Name

Multiome_RNA_RP029_G4_L004_P078_S68_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

165386430

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9093UXXC

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples