IGVFFI7217UBZT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6353IHVX(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G5_P062_L005_I2

md5sum

05d57cc457a8b307488c832230469636

Content MD5sum

0031ac7a9dc5de30d1b2375c24ee33d7

File Size

276 MB

Submitted File Name

Multiome_RNA_RP014_G5_L009_P062_S33_L005_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

44624087

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5142KRLD

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples