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INDEXED
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SequenceFile
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IGVFFI7178XYFK
IGVFFI7178XYFK
released
validated
Json view
File Set
IGVFDS9953SGYZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9031
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9031_R1
md5sum
8fe493a60ba0252ea2eb277e6ec0a17d
Content MD5sum
a2e9bac38a1d2ff937d1f045068cfbdd
File Size
2.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2285_L7_SS-PKR-177_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9031
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
48758887
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1399KNRB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7120MCOE
yaml
seqspec
seqspec of IGVFFI7178XYFK, IGVFFI0259CXAV, IGVFFI1893WKPQ
Jason Buenrostro, Broad
1.3 KB
validated