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INDEXED
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SequenceFile
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IGVFFI7144MCOK
IGVFFI7144MCOK
released
validated
Json view
File Set
IGVFDS3435SMCA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4342
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4342_R1
md5sum
b39f7d0dd127dd5bcb540db07a3b4afa
Content MD5sum
877d17ec341c4b6242e3a0d10f195ae1
File Size
3.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-553_L1_SS-PKR-177_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4342
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
55727423
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9301TAMU
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3842RMCY
yaml
seqspec
seqspec of IGVFFI7144MCOK, IGVFFI7265WRHS, IGVFFI0479HPGI
Jason Buenrostro, Broad
1.3 KB
validated