Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI7139DEEN
IGVFFI7139DEEN
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3245PEOK
(single-nucleus ATAC-seq (10x multiome))
Summary
I1 reads from sequencing run 343
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX21-SC4_snATAC_S2_I1
md5sum
c9d776eaf29893dfd6bee4550f7baa7c
Content MD5sum
19b65d3eb3133434fba8cdec52b44eaf
File Size
4.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX21-SC4/AH7T7MDSX7/XHLT1-POOL-XX21-SC4-ATAC_S12_L004_I1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
343
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
8
Read Count
616123991
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9160FXRO
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 44.0 years) peripheral blood mononuclear cell; ... and 15 more samples