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INDEXED
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SequenceFile
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IGVFFI7137LDOI
IGVFFI7137LDOI
released
validated
Json view
File Set
IGVFDS7911YQZW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8343
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8343_R1
md5sum
66e0b95f896c45775e23559c7c911c3e
Content MD5sum
8759f2d4271ded60837d1167f3719ac4
File Size
3.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2229_L8_SS-PKR-533_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8343
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
78906809
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1072XOVT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7926CEIJ
yaml
seqspec
seqspec of IGVFFI7137LDOI, IGVFFI6905GFET
Jason Buenrostro, Broad
1.2 KB
validated