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INDEXED
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SequenceFile
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IGVFFI7110WERA
IGVFFI7110WERA
released
validated
Json view
File Set
IGVFDS5438ZZYN
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P019-R2
md5sum
ae29a728fb48308f34c9d8e74d0449b7
Content MD5sum
7d6f500d0b76bd14a45d811257df6f48
File Size
6.6 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool19.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
42184297
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8521RJCQ
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.6 GB
validated
IGVFFI9383VIBN
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.3 GB
validated