IGVFFI7107JHPK

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3718PAFU(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G7_P014_L002_I1

md5sum

297f8d6061d80b608839bcb15d415cd9

Content MD5sum

180bccaa40ae661555e66e42a486c863

File Size

1.5 GB

Submitted File Name

Multiome_RNA_X014_G7_L007_P014_S19_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

237713283

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3915PNAB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples