{
"@context": "/terms/",
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"File",
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],
"accession": "IGVFFI7103JDWM",
"aliases": [
"jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-BioRep2-FFrep4-BinD-PCRrep3_I2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI7103JDWM](/sequence-files/IGVFFI7103JDWM/) has in progress subobject auxiliary set [IGVFDS7512GSQC](/auxiliary-sets/IGVFDS7512GSQC/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI7103JDWM/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "087657549ebe07305d051b389c3decf7",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-13T17:01:59.838502+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS7512GSQC/",
"file_size": 1980140,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI7103JDWM/@@download/IGVFFI7103JDWM.fastq.gz",
"illumina_read_type": "I2",
"index": "TACTTAGC:TGAC",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 4,
"md5sum": "a9138eca6a049244be87c7584ad0dc7d",
"mean_read_length": 4,
"minimum_read_length": 4,
"read_count": 245793,
"release_timestamp": "2023-12-21T01:30:44.190730+00:00",
"s3_uri": "s3://igvf-files/2023/12/13/ffab9920-c697-4866-934b-4bad155d2998/IGVFFI7103JDWM.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep2-FFRep4_BinD-PCRrep3_S375_I2_001.fastq.gz",
"summary": "I2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "ffab9920-c697-4866-934b-4bad155d2998"
}