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INDEXED
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SequenceFile
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IGVFFI7080OYJR
IGVFFI7080OYJR
released
validated
Json view
File Set
IGVFDS1445KWZM
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 4281
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4281_R1
md5sum
f53c1c8689c056a83852f794ddd99887
Content MD5sum
0de8493e1b87a896641c26f4371643bd
File Size
8.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-508_L4_SS-PKR-176_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4281
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
130752781
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7612HZVW
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4111TDKB
yaml
seqspec
seqspec of IGVFFI7080OYJR, IGVFFI1628WVBX, IGVFFI9842VLPT
Jason Buenrostro, Broad
1.4 KB
validated