Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI7078IVCN
IGVFFI7078IVCN
released
validated
Json view
File Set
IGVFDS9953SCFR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8340
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8340_R1
md5sum
53fdebf0355658494e600769fd0d406c
Content MD5sum
03b86e1ac2ba7018bc7d5c898124d986
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2226_L8_SS-PKR-530_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8340
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
69752240
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0205CCTB
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 530)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0367VOEG
yaml
seqspec
seqspec of IGVFFI7078IVCN, IGVFFI2584APXB
Jason Buenrostro, Broad
1.3 KB
validated