IGVFFI7069VLPN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7523ZOWN(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X045_G4_P046_L002_I2

md5sum

76df29e9fbb4be6abab1e157d9ab56b5

Content MD5sum

ed61868ded055abea135ea75ecdf324f

File Size

1.6 GB

Submitted File Name

Multiome_RNA_X045_G4_L004_P046_S8_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VKTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

247296075

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8872IRZA

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 84 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples