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IGVFFI7057YDWI

released
validated
File Set
IGVFDS2542HOJK(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
d4556acc09303b2b4da8cc38a7c412e9
Content MD5sum
5f9ad9e69d9a37165737ffa7d6e6a889
File Size
12 GB
Submitted File Name
igvf_007/nova1/igvf_007_B10_D_nova_N1_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
HWJMHDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
170383084

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 254 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7057YDWI, IGVFFI6110NTBY
Ali Mortazavi, UCI
1.4 KB
validated