IGVFFI7024ELEG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4641AQKE(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G2_P072_L008_I1

md5sum

b3cf12a0f9796128c10cace6005d8635

Content MD5sum

d19bf6ac38baec37506beedfac89288c

File Size

996 MB

Submitted File Name

Multiome_RNA_X053_G2_L002_P072_S66_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

130385685

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6916RHHD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples