IGVFFI7007BFUB

released
validated
File Set
IGVFDS8937ZULR(lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp12_multi_10x5_NGS4_r2
md5sum
ab1649d5374c7a7fc3dc95f60283e650
Content MD5sum
5e70d24a0fc80a8fe99debad1359af1d
File Size
746 MB
Submitted File Name
/oak/stanford/projects/igvf/Projects/240425_IGVF12_McGinnis/MULTI/FASTQ/MULTI5_S12_L004_R2_001.fastq.gz
Checkfiles Version

Sequencing Details

Sequencing Platform
Sequencing Run
1
Flowcell ID
225LWLLT3
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
90
Read Count
15944661

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
cell hashing barcodes
cell hashing barcodes
Ansuman Satpathy, Stanford
248 KB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7007BFUB, IGVFFI5111HMGH, IGVFFI4095SOPA, IGVFFI4840WSPP
Ansuman Satpathy, Stanford
1.3 KB
validated

Attribution

Award
Principal Investigator(s)
Contact P.I.
Lab