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INDEXED
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SequenceFile
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IGVFFI7000NPFQ
IGVFFI7000NPFQ
released
validated
Json view
File Set
IGVFDS3330GATY
(snM3C-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C29_day0_L3_R2
md5sum
4f4a037dbc4e83b4e63ab43117f96b4e
Content MD5sum
57df732ad05fd16928a0e12ab25ce0f5
File Size
2.4 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl48/20231016-3C29D0-Pos1-B02_S13_L003_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
148.38
Read Count
34253048
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8575NPOB
InVitroSystem
fibroblast
fibroblast cell line, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA