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INDEXED
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SequenceFile
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IGVFFI6989OQCU
IGVFFI6989OQCU
released
validated
Json view
File Set
IGVFDS9002DRHP
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P017-R2
md5sum
4e33feee0bc824265efc5116b192a0ec
Content MD5sum
3a31c950913a6caf3d355a9c4a29b3a4
File Size
6.8 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool17.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
44454996
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3069YJLI
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.5 GB
validated
IGVFFI8600YMGO
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.7 GB
validated