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INDEXED
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SequenceFile
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IGVFFI6977ITAT
IGVFFI6977ITAT
released
validated
Json view
File Set
IGVFDS7571FXYP
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3833
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3833_R1
md5sum
b05cac741de1f003db33cf7979e3b466
Content MD5sum
6b5af431ada275efef867ab1782e7662
File Size
932 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1538_L2_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3833
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
18945003
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7442LQET
yaml
seqspec
seqspec of IGVFFI6977ITAT, IGVFFI2496FAKM
Jason Buenrostro, Broad
1.3 KB
validated