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INDEXED
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SequenceFile
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IGVFFI6958KNOZ
IGVFFI6958KNOZ
released
validated
Json view
File Set
IGVFDS5995LBLA
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C37_day14_L3_R1
md5sum
ffb1ea740c73e20e1d6eacf6d4d29df6
Content MD5sum
d783a5d92f94eb3df3cef577d2a106da
File Size
2.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl48/20231016-3C37D14-Pos1-A11_S10_L003_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.09
Read Count
44120896
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9219HKPT
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 14 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA