IGVFFI6948NPSB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1508FUGO(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X055_G5_P074_L004_R1

md5sum

c367f3ec427438ef6ff9a84c547680c5

Content MD5sum

accf4a29d185c83fdfe1c7fd98b58ba1

File Size

14 GB

Submitted File Name

Multiome_RNA_X055_G5_L005_P074_S25_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

161540017

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5353OLLQ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 74 years) cerebellar cortex tissue; ... and 8 more samples