IGVFFI6938OAYF

released
validated
File Set
IGVFDS1482MIEF(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220228_8merInsertion-THP1-Amp_PPIF_promoter-BioRep3-FFrep1-BinA-PCRrep2_R2
md5sum
dc9702edc0413329659153f27353e8d7
Content MD5sum
ff18e6dd676a94fb0a2fd896804f1287
File Size
16 MB
Submitted File Name
220426pPPIF_REPEAT-THP1-Gen8b-pPPIF-Amp_pPPIF-BioRep1-FFRep1-BinA-PCRrep2_S97_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
2
Illumina Read Type
R2
Index
CTACCAGG:TGAC
Average Read Length
150
Read Count
360925

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 0-10% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution