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IGVFFI6932KYFZ

released
validated
File Set
IGVFDS2439BCVO(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2376
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2376_R1
buenrostro-bernstein:SS-LS_2376_R1
md5sum
24c14a355974ede0ac2338d6cc096b4a
Content MD5sum
85925d6b539dff25d1e862242539c8f5
File Size
271 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-44_L2_SS-PKR-4_SS-V2-PLATE2-1st-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2376
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
13498448

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (49 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad