{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI6927GQDY/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI6927GQDY",
"aliases": [
"jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinD-PCRrep1_R1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI6927GQDY](/sequence-files/IGVFFI6927GQDY/) has in progress subobject auxiliary set [IGVFDS3190HKSW](/auxiliary-sets/IGVFDS3190HKSW/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI6927GQDY/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "9e4b8b906d0ecbbc0ef5605091d57ea8",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T20:38:17.888701+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS3190HKSW/",
"file_size": 3485523,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI6927GQDY/@@download/IGVFFI6927GQDY.fastq.gz",
"illumina_read_type": "R1",
"index": "TAAGCACA:CAGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "3f8e140f8e702ef74b9e62e5ad65bb1b",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 102337,
"release_timestamp": "2023-12-20T23:25:38.371378+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/9ecf8eef-3bc9-483c-b9cb-9a4d0d8784a5/IGVFFI6927GQDY.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep1-FFrep3-BinD-PCRrep1_S43_R1_001.fastq.gz",
"summary": "R1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "9ecf8eef-3bc9-483c-b9cb-9a4d0d8784a5"
}