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INDEXED
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SequenceFile
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IGVFFI6921XINB
IGVFFI6921XINB
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5370
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5370_R1
md5sum
d0bd1e1a30a01bafbc2e415b376261a8
Content MD5sum
1fa8beecddbbdeb8c9da250085623f89
File Size
6.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1575_L3_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5370
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
151309942
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9837KUMF
yaml
seqspec
seqspec of IGVFFI6921XINB, IGVFFI1441LHXN
Jason Buenrostro, Broad
1.3 KB
validated