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INDEXED
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SequenceFile
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IGVFFI6902SHCD
IGVFFI6902SHCD
released
validated
Json view
File Set
IGVFDS4753QHJH
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C29_day5_L3_R1
md5sum
9d37dd92dedf0a28a3a8491cacfa6d3c
Content MD5sum
1c17ca002ca58e21c4b9adcc322f31ac
File Size
5.7 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl52/20231219-C29D5-Pos1-A05_S5_L003_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
149.57
Read Count
67349729
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2376KHRW
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 5 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA