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INDEXED
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SequenceFile
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IGVFFI6874DKSO
IGVFFI6874DKSO
released
validated
Json view
File Set
IGVFDS0512QYBW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7390
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7390_R1
md5sum
a914ff8c85da1da3c2f80c7774ca2828
Content MD5sum
b7d6d2e70de79dbf8366f4b3dde19691
File Size
5.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1951_L2_SS-PKR-502_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
7390
Flowcell ID
22KFLYLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
147192924
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6459ANYG
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 502)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2979POWY
yaml
seqspec
seqspec of IGVFFI6874DKSO, IGVFFI5419VJUK
Jason Buenrostro, Broad
1.3 KB
validated