Home

IGVFFI6867FJXY

released
validated
File Set
IGVFDS0582VJBG(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
c0f66bbe93cdc0f7050a2c747c11a606
Content MD5sum
4ccaf5f0e0f941da514d1aa3785751ff
File Size
22 GB
Submitted File Name
igvf_008/nova1/igvf_008_B02_D_nova_N1_L002_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
H2W3JDSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
329362382

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus AJ (male, 69 days) epididymis tissue; Mus musculus PWK/PhJ (female, 69 days) oviduct tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6867FJXY, IGVFFI1069YSNT
Ali Mortazavi, UCI
1.4 KB
validated