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SequenceFile
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IGVFFI6865PWXR
IGVFFI6865PWXR
released
validated
Json view
File Set
IGVFDS1098YTNX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3992
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3992_R1
md5sum
670acc1aebcf274c93628f365a2519fd
Content MD5sum
e1732271f637788a580369628ad431fb
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-691_L7_SS-PKR-180_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3992
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
21441511
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4941CPCX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4110MAQV
yaml
seqspec
seqspec of IGVFFI6865PWXR, IGVFFI9019EFGH, IGVFFI1206RYSI
Jason Buenrostro, Broad
1.4 KB
validated