Home

IGVFFI6862XPQT

released
validated
File Set
IGVFDS4638GTKE(CRISPR base editing FACS screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
richard-sherwood:B3.1_18loci_Rep3_bulk_read1
md5sum
beda57fbfbc719e238f2cc10f790284a
Content MD5sum
7b709b3466e38c003160d7a8427d2e97
File Size
5.5 MB
Submitted File Name
/net/bgm/sherwood/Tian_demult_data/nextseq_051523_Tian/fixed/B3.1_18loci_Rep3_bulk_R1.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Element Biosciences AVITI
Sequencing Run
1
Illumina Read Type
R1
Average Read Length
68
Read Count
221911

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HepG2 cell line, male, Homo sapiens modified with CRISPR base editing SpRY-ABE8e, transduced (lentivirus) with a guide library (MOI of 0.5)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
csv
guide quantifications
guide quantifications
Richard Sherwood, Brigham and Women's Hospital
336 KB
validated

Attribution

Award
HG012010
Principal Investigator(s)
Contact P.I.
Luca Pinello
Lab
Richard Sherwood, Brigham and Women's Hospital