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INDEXED
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SequenceFile
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IGVFFI6857CDMM
IGVFFI6857CDMM
released
validated
Json view
File Set
IGVFDS7929XOMS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4255
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4255_R1
md5sum
1349670e998286bc21bc4ab3b59decf2
Content MD5sum
6b382219a4dad05999e5fb4988132e4d
File Size
2.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-639_L8_SS-PKR-199_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4255
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
42015852
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4768GZVP
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2380WLBY
yaml
seqspec
seqspec of IGVFFI6857CDMM, IGVFFI2933ZBVB, IGVFFI6782CBIV
Jason Buenrostro, Broad
1.3 KB
validated