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IGVFFI6844VZPJ

released
validated
File Set
IGVFDS2610IANK(scRNA-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:Bcells_don1_scRNAseq_GEX_NGS_S1_L002_R1
md5sum
f2d34198479e6d6d05b625ca83a3259f
Content MD5sum
55b617b418f9744c1f00a5278f08ead0
File Size
15 GB
Submitted File Name
/ix/djishnu/Common_Folder/Pease_Data/scRNA_220830/fastq_data/20220726_Singh_Pease_HumanBcell_NP_001_5Pv2_GEX_SIN3252A1_S1_L002_R1_001.fastq.gz
Checkfiles Version
v20
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq 6000 S1 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
28
Read Count
714918884

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days; ... and 2 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
hdf5
filtered feature barcode matrix
cell by gene expression by antibody capture in filtered feature barcode matrix
Harinder Singh, University of Pittsburgh
158 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6844VZPJ, IGVFFI7785ZSYW, IGVFFI5699IPNL, IGVFFI4303LQSC
Harinder Singh, University of Pittsburgh
1.5 KB
validated