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IGVFFI6840FYGJ

released
validated
File Set
IGVFDS2058QARC(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
892394a7d256d6945147353bf2a2fc35
Content MD5sum
e1087f5be17ad76f8fc1c40c95db6646
File Size
12 GB
Submitted File Name
igvf_003/nova2/igvf_003_B16_D_nova_N2_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7
Flowcell ID
HJ73MDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
168922099

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; Mus musculus 129S1J (male, 72 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.2 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6840FYGJ, IGVFFI5770WSAN
Ali Mortazavi, UCI
1.4 KB
validated