IGVFFI6825XFSE

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1905QFFH(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP026_G6_P076_L006_R2

md5sum

9adaa8413fe7135c21629c8ef6c2b883

Content MD5sum

e7774304d2eb776ce6e19752eccc80f9

File Size

13 GB

Submitted File Name

Multiome_RNA_RP026_G6_L006_P076_S46_L006_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

186507258

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5241MOXO

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 6 more samples