Home

IGVFFI6817UCEX

released
validated
File Set
IGVFDS0681XTSI(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp13_atac_10x3_NGS2_r2
md5sum
ab1a98c69ace15efe3c6e62290e4492c
Content MD5sum
8927fbee743256443370306d241e425f
File Size
5.1 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/tq_fastqs/ATAC/igvf13_s3_atac_S3_L002_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22JL3GLT3
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
24
Read Count
307433357

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
5.5 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5454AQJA, IGVFFI8687AWYN, IGVFFI6817UCEX, IGVFFI4227LKME
Ansuman Satpathy, Stanford
1.4 KB
validated