IGVFFI6817QVHH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6769MHJX(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X041_G3_P042_L002_R2

md5sum

121e86bfbc3179a2952bfd6e372ff6f0

Content MD5sum

4d7fea5a822d792a42de7facd7aa4157

File Size

2.5 GB

Submitted File Name

Multiome_RNA_X041_G3_L003_P042_S13_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

222YMLLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

58466140

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5674WWIP

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 82 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples