Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI6794XSOX
IGVFFI6794XSOX
released
validated
Json view
File Set
IGVFDS2636NOED
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1551
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1551_R2
buenrostro-bernstein:SS-LS_1551_R2
md5sum
80b97f32b023275ef65d83ec63eac75d
Content MD5sum
49255e686054015017f8d85950ee83f5
File Size
7.8 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1144_L2_SS-PKR-7_SS-V2-PLATE2-2nd-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1551
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
131
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8077ATDC
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (29 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad