IGVFFI6784KYZR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7137NKCZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X054_G8_P072_L002_R1

md5sum

ecdefcd94bb9ab547d4abdc83cb196d0

Content MD5sum

a6aa528e337332daecbc22f9bf4e6968

File Size

16 GB

Submitted File Name

Multiome_RNA_X054_G8_L008_P072_S20_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

181946688

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9204TXPW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) putamen tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 8 more samples