IGVFFI6768TJHO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4214PHWD(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G8_P056_L003_I2

md5sum

459a92a10a1fdd19f9ce4e84b20b3e78

Content MD5sum

3970b2329b4754a6153ab1d1f0bf019e

File Size

460 MB

Submitted File Name

Multiome_RNA_RP005_G8_L008_P056_S20_L003_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

79795708

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5214FLGB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples