IGVFFI6745IPOS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9179BFME(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X054_G2_P072_L008_R1

md5sum

6a0deeb8211c7c703e327decb5f2dbd9

Content MD5sum

af544faf8d4a47bcb24cd1befbf49700

File Size

15 GB

Submitted File Name

Multiome_RNA_X054_G2_L002_P072_S74_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

169518934

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9796VADK

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) putamen tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 8 more samples