IGVFFI6735NPCN

released
validated
File Set
IGVFDS2114RIWO(CRISPR HiCAR integrating a non-targeting guide (sgRNA) library)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-control-1umET1-ipsc-cm-targeted-hicar-rep1-R2
md5sum
98853f19b78c921169d27c5186efae1b
Content MD5sum
cef170d52ca82b52322871f7c2f2dd00
File Size
1.1 GB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_human/crispra_hicar_human_fastq/H_vp64_r2_NT_1_1uMET1_ds.6a7891929f354459a698439ff23cadd2/H_vp64_r2_NT_1_1uMET1_S6_L001_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R2
Average Read Length
100
Read Count
20412121

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens treated with 1 μM Endothelin-1 for 3 days, transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
37 MB
validated

Attribution