IGVFFI6731OEXO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9145ELFW(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X051_G2_P069_L003_R2

md5sum

cad800fd92919c65c05d0bfa0c52fd30

Content MD5sum

2587946f4e53cb2884af292bde96a0dc

File Size

2.4 GB

Submitted File Name

Multiome_ATAC_X051_G2_L002_P069_S10_L003_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

140367482

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7066LYTG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 80 years) cerebellar cortex tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 8 more samples