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INDEXED
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SequenceFile
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IGVFFI6685TKRE
IGVFFI6685TKRE
released
validated
Json view
File Set
IGVFDS7019WXPW
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
a802a9222c5d5231887272a5935c1e92
Content MD5sum
ff861a52137f74d112230f4efd9d3e63
File Size
6.3 GB
Submitted File Name
igvf_009/nova2/igvf_009_B07_D_nova_N2_L003_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7
Flowcell ID
H5VH3DSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
166188560
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9250IOWY
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0155XOPY
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3193YTCE
yaml
seqspec
seqspec of IGVFFI9703FJJE, IGVFFI6685TKRE
Ali Mortazavi, UCI
1.3 KB
validated