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SequenceFile
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IGVFFI6680PXKS
IGVFFI6680PXKS
released
validated
Json view
File Set
IGVFDS0046XBVO
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8704
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8704_R1
md5sum
fefbfb34fe62f825bb21426d9e6ca5c0
Content MD5sum
9b1bd63d7f59251db904e49eb74f4355
File Size
747 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2342_L3_SS-PKR-206_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8704
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
16623101
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8717QNQV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4985HGPZ
yaml
seqspec
seqspec of IGVFFI6680PXKS, IGVFFI6697TKNF, IGVFFI0731FJXI
Jason Buenrostro, Broad
1.3 KB
validated