IGVFFI6661JWXJ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1215OQQW(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X037_G8_P038_L002_I2

md5sum

ffa8ab7c0574be447b364fd59b31b7f5

Content MD5sum

94106b8209b454186ff421e24e6bff05

File Size

1.4 GB

Submitted File Name

Multiome_RNA_X037_G8_L008_P038_S14_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VM5DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

209667882

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2081GQXM

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 81 years) cerebellar cortex tissue associated with Parkinson's disease; Homo sapiens (male, 81 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples