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INDEXED
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SequenceFile
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IGVFFI6632WSPV
IGVFFI6632WSPV
released
validated
Json view
File Set
IGVFDS8259EHVC
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4365
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4365_R1
md5sum
f489ea4e08413ace96255398dffcc14f
Content MD5sum
a0a91fdb8dae5b4ea3061fbee8bbee3c
File Size
6.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-540_L2_SS-PKR-172_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4365
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
102477944
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8891SAOK
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4559ZDST
yaml
seqspec
seqspec of IGVFFI6632WSPV, IGVFFI4221JNNZ, IGVFFI2509KGDL
Jason Buenrostro, Broad
1.3 KB
validated