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INDEXED
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SequenceFile
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IGVFFI6612ZGGB
IGVFFI6612ZGGB
released
validated
Json view
File Set
IGVFDS3058TSDS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4397
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4397_R1
md5sum
fa785a80fc728be84aa424fb5ac64979
Content MD5sum
b3df4d0ea0dedb4ba61c7b2596e25fa2
File Size
2.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1500_L4_SS-PKR-204_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4397
Flowcell ID
22JMFMLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
49281690
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7373BGAB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 204)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8685EMWP
yaml
seqspec
seqspec of IGVFFI6612ZGGB, IGVFFI9419OUYK, IGVFFI3032ANDY
Jason Buenrostro, Broad
1.3 KB
validated