IGVFFI6573UWPX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5941HKIT(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X024_G6_P024_L004_I1

md5sum

6d3202ea39757454fde0032e35393793

Content MD5sum

feb718f2942b9e77612923d3f10d0cb1

File Size

1.6 GB

Submitted File Name

Multiome_RNA_X024_G6_L006_P024_S44_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

231504946

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0702KZGF

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 78 years) cerebellar cortex tissue associated with Parkinson's disease; Homo sapiens (male, 75 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples