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INDEXED
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SequenceFile
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IGVFFI6571IHMT
IGVFFI6571IHMT
released
validated
Json view
File Set
IGVFDS7181HIBH
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C39_day18_L2_R1
md5sum
0577b7682af2c2a12cb43f5c44bf86ce
Content MD5sum
62d930907e7e6b2426e67137114fd7cc
File Size
5.4 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C39D18-Pos1-B03_S15_L002_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.63
Read Count
71740212
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7858NBZK
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 18 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA