IGVFFI6560JFRW

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8184HHTJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G1_P056_L004_I2

md5sum

04c1fbee136345df3f5f344a7cce1d20

Content MD5sum

b39018a837769d9a367671a22ad6e62d

File Size

458 MB

Submitted File Name

Multiome_RNA_RP007_G1_L001_P056_S29_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

73744603

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3050FUJW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples